Guangyuan Liao, Casey O. Diekman, Amitabha Bose. 2025. "Dynamics of phase tumbling and the reentrainment of circadian oscillators." Mathematical Biosciences, vol. 381, no. 109381.
Klavdia Zemlianova, Amitabha Bose, John Rinzel. 2024. " Dynamical mechanisms of how an RNN keeps a beat, uncovered with a low-dimensional reduced model." Scientific Reports, vol. 24, pp. 26388.
Ed Large, Iran Roman, Ji Chul Kim, Jonathan Cannon, Jesse Pazdera, Laurel Trainor, John Rinzel, Amitabha K. Bose. 2023. "Dynamic models for musical rhythm perception and coordination." Frontiers in Computational Neuroscience, vol. 17.
Casey Diekman, Amitabha Bose. 2022. "Beyond the limits of circadian entrainment: Non-24-hour sleep-wake disorder, shift work, and social jet lag." Journal of Theoretical Biology, vol. 545, pp. 111148.
Guangyuan Liao, Amitabha Bose. 2022. "Entrainment within hierarchical circadian networks." Mathematical Biosciences, vol. 351, pp. 108883.
Klavdia Zemlianova, Amitabha K. Bose, John Rinzel. 2022. "A Biophysical Counting Mechanism for Keeping Time." Biological Cybernetics, vol. 116, pp. 205-218.
Mariano Marcano, Amitabha K. Bose, Paul Bayman. 2021. "A one-dimensional map to study multi-seasonal coffee infestation by the coffee berry borer." Mathematical Biosciences, vol. 333.
Guangyuan Liao, Casey O. Diekman, Amitabha K. Bose. 2020. "Entrainment dynamics of forced hierarchical circadian systems revealed by 2-dimensional maps." SIAM Journal of Applied Dynamical Systems, vol. 19, no. 3.
Áine Byrne, John Rinzel, Amitabha K. Bose. 2020. "Order-indeterminant event-based maps for learning a beat." Chaos, vol. 30, no. 8.
Diana Martinez, Haroon Anwar, Amitabha K. Bose, Dirk M. Bucher, Farzan Nadim. "Short-Term Synaptic Dynamics Control the Activity Phase of Neurons in an Oscillatory Network." eLife.
Amitabha K. Bose, Aine Byrne, John Rinzel. 2019. "A neuromechanistic model for rhythmic beat generation." PLOS Computational Biology, vol. 15, no. 5, pp. e1006450.
Zeynep Akcay, Xinxian Huang, Farzan Nadim, Amitabha K. Bose. 2018. "Phase-locking and bistability in neuronal networks with synaptic depression." Physica D: Nonlinear Phenomena, vol. 364, pp. 8-21.
Casey O. Diekman, Amitabha K. Bose. 2018. "Reentrainment of the circadian pacemaker during jet lag: east-west asymmetry and the effects of north-south travel." Journal of Theoretical Biology, vol. 437, pp. 261-285.
Kaustubh Manchanda, Amitabha K. Bose, Ramakrishna Ramaswamy. 2017. "Collective dynamics in heterogeneous networks of neuronal cellular automata." Physica A: Statistical Mechanics and its Applications, vol. 487, pp. 111-124.
Jorge P. Golowasch, Amitabha K. Bose, Y. Guan, D. Salloum, A. Roeser, Farzan Nadim. 2017. "A balance of outward and linear inward ionic currents is required for generation of slow-wave oscillations." Journal of Neurophysiology, vol. 118, pp. 1092-1104.
Casey O. Diekman, Amitabha K. Bose. 2016. "Entrainment maps: a new tool for understanding circadian oscillator models." Journal of Biological Rhythms, vol. 31, no. 6, pp. 598-616.
Christina Mouser, Amitabha K. Bose, Farzan Nadim. 2016. "The role of electrical coupling in generating and modulating oscillations in a neuronal network." Mathematical Biosciences, vol. 278, pp. 11-21.
Essay
"Lessons from our advisor Christopher K.R.T. Jones" AMS Notices, May, 2024.
Technical Report
"Entrainment dynamics of forced hierarchical circadian systems revealed by 2-dimensional maps" arXiv, April (2nd Quarter/Spring), 2020.