Casey Diekman
Associate Professor, Mathematical Sciences
506 Cullimore Hall
About Me
BS from Purdue University (2002), MS and PhD from University of Michigan (2005,2010), Postdoctoral Fellow at the Mathematical Biosciences Institute at The Ohio State University (2010-2013)
Education
Ph.D.; University of Michigan; Bioinformatics; 2010
M.S.; University of Michigan; Industrial & Operations Engineering; 2005
B.S.; Purdue University; Industrial Engineering; 2002
M.S.; University of Michigan; Industrial & Operations Engineering; 2005
B.S.; Purdue University; Industrial Engineering; 2002
Teaching Interests
differential equations, mathematical modeling, mathematical biology
Past Courses
MATH 111: CALCULUS I
MATH 112: CALCULUS II
MATH 227: MATHEMATICAL MODELING
MATH 328: MATH METHODS FOR SCI & ENGR
MATH 373: INTRO TO MATHEMATICAL BIOLOGY
MATH 473: INTERMED DIFFEREN EQUATN
MATH 573: INTERMED DIFF EQUATIONS
MATH 676: ADV ORDINARY DIFFE EQ
MATH 112: CALCULUS II
MATH 227: MATHEMATICAL MODELING
MATH 328: MATH METHODS FOR SCI & ENGR
MATH 373: INTRO TO MATHEMATICAL BIOLOGY
MATH 473: INTERMED DIFFEREN EQUATN
MATH 573: INTERMED DIFF EQUATIONS
MATH 676: ADV ORDINARY DIFFE EQ
Research Interests
dynamical systems, mathematical neuroscience, circadian rhythms
Journal Article
Liao, Guangyuan, & Diekman, Casey, & Bose, Amitabha (2020). Entrainment dynamics of forced hierarchical circadian systems revealed by 2-dimensional maps. SIAM Journal of Applied Dynamical Systems, 19(3),
Kim, Pyonghwa, & Porr, Brianna , & Mori, Tetsuya , & Kim, Yong-Sung , & Johnson, Carl , & Diekman, Casey, & Kim, Yong (2020). CikA, an input pathway component, senses the oxidized quinone signal to generate phase delays in the cyanobacterial circadian clock. Journal of Biological Rhythms,
Jeong, Young, & Dias, Cristiano, & Diekman, Casey, & Brochon, Helen, & Kim, , & Kaur, Manpreet, & Kim, Yong-Sung, & Jang, Hye-In, & Kim, Yong (2019). Magnesium regulates the circadian oscillator in cyanobacteria. Journal of Biological Rhythms, 34(4), 380-390.
Jeong, Young, & Dias, Cristiano, & Diekman, Casey, & Brochon, Helene, & Kim, Pyonghwa, & Kaur, Manpreet, & Kim, Yong-Sung, & Jang, Hye-In, & Kim, Yong (2019). Magnesium regulates the circadian oscillator in cyanobacteria. . Journal of Biological Rhythms, 34(4), 380-390.
Kaur, Manpreet, & Ng, Amy, & Kim, Pyonghwa, & Diekman, Casey, & Kim, Yong (2019). CikA Modulates the Effect of KaiA on the Period of the Circadian Oscillation in KaiC Phosphorylation. JOURNAL OF BIOLOGICAL RHYTHMS,
Kim, Pyonghwa, & Porr, Brianna , & Mori, Tetsuya , & Kim, Yong-Sung , & Johnson, Carl , & Diekman, Casey, & Kim, Yong (2020). CikA, an input pathway component, senses the oxidized quinone signal to generate phase delays in the cyanobacterial circadian clock. Journal of Biological Rhythms,
Jeong, Young, & Dias, Cristiano, & Diekman, Casey, & Brochon, Helen, & Kim, , & Kaur, Manpreet, & Kim, Yong-Sung, & Jang, Hye-In, & Kim, Yong (2019). Magnesium regulates the circadian oscillator in cyanobacteria. Journal of Biological Rhythms, 34(4), 380-390.
Jeong, Young, & Dias, Cristiano, & Diekman, Casey, & Brochon, Helene, & Kim, Pyonghwa, & Kaur, Manpreet, & Kim, Yong-Sung, & Jang, Hye-In, & Kim, Yong (2019). Magnesium regulates the circadian oscillator in cyanobacteria. . Journal of Biological Rhythms, 34(4), 380-390.
Kaur, Manpreet, & Ng, Amy, & Kim, Pyonghwa, & Diekman, Casey, & Kim, Yong (2019). CikA Modulates the Effect of KaiA on the Period of the Circadian Oscillation in KaiC Phosphorylation. JOURNAL OF BIOLOGICAL RHYTHMS,
SHOW MORE
Belle, Mino, & Diekman, Casey (2018). Neuronal oscillations on an ultra-slow timescale: daily rhythms in electrical activity and gene expression in the mammalian master circadian clockwork. European Journal of Neuroscience, 48(8), 2696-2717.
Moye, Matthew, & Diekman, Casey (2018). Data assimilation methods for neuronal state and parameter estimation. Journal of Mathematical Neuroscience, 8(11), 1-38.
Kass, Robert, & Amari, Shun-ichi, & Arai, Kensuke, & Brown, Emery, & Diekman, Casey, & Diesmann, Markus, & Doiron, Brent, & Eden, Uri, & Fairhall, Adrienne, & Fiddyment, Grant, & Fukai, Tomoki, & Grun, Sonja, & Harrison, Matthew, & Helias, Moritz, & Nakahara, Hiroyuki, & Teramae, Jun-nosuke, & Thomas, Peter, & Reimers, Mark, & Rodu, Jordan, & Rotstein, Horacio, & Shea-Brown, Eric, & Shimazaki, Hideaki, & Shinomoto, Shigeru, & Yu, Byron, & Kramer, Mark (2018). Computational neuroscience: mathematical and statistical perspectives. Annual Review of Statistics and its Applications, 5(1), 183-214.
Diekman, Casey, & Bose, Amitabha (2018). Reentrainment of the circadian pacemaker during jet lag: east-west asymmetry and the effects of north-south travel. Journal of Theoretical Biology, 437, 261-285.
Diekman, Casey, & Thomas, Peter, & Wilson, Christopher (2017). Eupnea, tachypnea, and autoresuscitation in a closed-loop respiratory control model. Journal of Neurophysiology,
Wegner, Sven, & Belle, Mino, & Hughes, Alun, & Diekman, Casey, & Piggins, Hugh (2017). Delayed Cryptochrome Degradation Asymmetrically Alters the Daily Rhythm in Suprachiasmatic Clock Neuron Excitability. Journal of Neuroscience,
Diekman, Casey, & Bose, Amitabha (2016). Entrainment maps: a new tool for understanding circadian oscillator models. Journal of Biological Rhythms, 31(6), 598-616.
Flourakis, Matthieu, & Kula-Eversole, Elzbieta , & Hutchison, Alan, & Han, Tae , & Aranda, Kimberly , & Moose, Devon, & White, Kevin, & Dinner, Aaron, & Lear, Bridget, & Ren, Dejian , & Diekman, Casey, & Raman, Indira, & Allada, Ravi (2015). A Conserved Bicycle Model for Circadian Clock Control of Membrane Excitability . Cell, 162(4), 836-848.
Diekman, Casey, & Dasgupta, Kohinoor, & Nair, Vijay, & Unnikrishnan, K.P. (2014). Discovering functional neuronal connectivity from serial patterns in spike train data. Neural Computation, 26(7), 1263-1297.
Diekman, Casey, & Golubitsky, Martin (2014). Network symmetry and binocular rivalry experiments. The Journal of Mathematical Neuroscience, 4(12), 29 pages.
Terman, David, & Rubin, Jonathan, & Diekman, Casey (2013). Irregular activity arises as a natural consequence of synaptic inhibition. Chaos: An Interdisciplinary Journal of Nonlinear Science, 23(4), 20 pages.
Diekman, Casey, & Belle, Mino, & Irwin, Robert, & Allen, Charles, & Piggins, Hugh, & Forger, Daniel (2013). Causes and consequences of hyperexcitation in central clock neurons. PLOS Computational Biology, 9(8), 11 pages.
Diekman, Casey, & Golubitsky, Martin, & Wang, Yunjiao (2013). Derived patterns in binocular rivalry experiments. Journal of Mathematical Neuroscience, 3(6),
Diekman, Casey, & Fall, Christopher, & Lechleiter, James, & Terman, David (2013). Modeling the neuroprotective role of enhancing astrocyte mitochondrial metabolism during stroke. Biophysical Journal, 104, 1752-1763.
Diekman, Casey, & Golubitsky, Martin, & McMillen, Tyler, & Wang, Yunjiao (2012). Reduction and dynamics of a generalized rivalry network with two learned patterns. SIAM Journal of Applied Dynamical Systems, 11, 1270-1309.
Belle, Mino, & Diekman, Casey, & Forger, Daniel, & Piggins, Hugh (2009). Daily electrical silencing in the mammalian circadian clock. Science, 326, 281-284.
Diekman, Casey, & Sastry, P.S., & Unnikrishnan, K.P. (2009). Statistical significance of sequential firing patterns in multi-neuronal spike trains. Journal of Neuroscience Methods, 182, 279-284.
Diekman, Casey, & Forger, Daniel (2009). Clustering predicted by an electrophysiological model of the suprachiasmatic nucleus. Journal of Biological Rhythms, 24, 322-333.
Diekman, Casey, & He, W, & Prabhu, N, & Cramer, H (2003). Hybrid methods for automated diagnosis of breast tumors. Analytical and Quantitative Cytology and Histology , 25, 183-190.
Moye, Matthew, & Diekman, Casey (2018). Data assimilation methods for neuronal state and parameter estimation. Journal of Mathematical Neuroscience, 8(11), 1-38.
Kass, Robert, & Amari, Shun-ichi, & Arai, Kensuke, & Brown, Emery, & Diekman, Casey, & Diesmann, Markus, & Doiron, Brent, & Eden, Uri, & Fairhall, Adrienne, & Fiddyment, Grant, & Fukai, Tomoki, & Grun, Sonja, & Harrison, Matthew, & Helias, Moritz, & Nakahara, Hiroyuki, & Teramae, Jun-nosuke, & Thomas, Peter, & Reimers, Mark, & Rodu, Jordan, & Rotstein, Horacio, & Shea-Brown, Eric, & Shimazaki, Hideaki, & Shinomoto, Shigeru, & Yu, Byron, & Kramer, Mark (2018). Computational neuroscience: mathematical and statistical perspectives. Annual Review of Statistics and its Applications, 5(1), 183-214.
Diekman, Casey, & Bose, Amitabha (2018). Reentrainment of the circadian pacemaker during jet lag: east-west asymmetry and the effects of north-south travel. Journal of Theoretical Biology, 437, 261-285.
Diekman, Casey, & Thomas, Peter, & Wilson, Christopher (2017). Eupnea, tachypnea, and autoresuscitation in a closed-loop respiratory control model. Journal of Neurophysiology,
Wegner, Sven, & Belle, Mino, & Hughes, Alun, & Diekman, Casey, & Piggins, Hugh (2017). Delayed Cryptochrome Degradation Asymmetrically Alters the Daily Rhythm in Suprachiasmatic Clock Neuron Excitability. Journal of Neuroscience,
Diekman, Casey, & Bose, Amitabha (2016). Entrainment maps: a new tool for understanding circadian oscillator models. Journal of Biological Rhythms, 31(6), 598-616.
Flourakis, Matthieu, & Kula-Eversole, Elzbieta , & Hutchison, Alan, & Han, Tae , & Aranda, Kimberly , & Moose, Devon, & White, Kevin, & Dinner, Aaron, & Lear, Bridget, & Ren, Dejian , & Diekman, Casey, & Raman, Indira, & Allada, Ravi (2015). A Conserved Bicycle Model for Circadian Clock Control of Membrane Excitability . Cell, 162(4), 836-848.
Diekman, Casey, & Dasgupta, Kohinoor, & Nair, Vijay, & Unnikrishnan, K.P. (2014). Discovering functional neuronal connectivity from serial patterns in spike train data. Neural Computation, 26(7), 1263-1297.
Diekman, Casey, & Golubitsky, Martin (2014). Network symmetry and binocular rivalry experiments. The Journal of Mathematical Neuroscience, 4(12), 29 pages.
Terman, David, & Rubin, Jonathan, & Diekman, Casey (2013). Irregular activity arises as a natural consequence of synaptic inhibition. Chaos: An Interdisciplinary Journal of Nonlinear Science, 23(4), 20 pages.
Diekman, Casey, & Belle, Mino, & Irwin, Robert, & Allen, Charles, & Piggins, Hugh, & Forger, Daniel (2013). Causes and consequences of hyperexcitation in central clock neurons. PLOS Computational Biology, 9(8), 11 pages.
Diekman, Casey, & Golubitsky, Martin, & Wang, Yunjiao (2013). Derived patterns in binocular rivalry experiments. Journal of Mathematical Neuroscience, 3(6),
Diekman, Casey, & Fall, Christopher, & Lechleiter, James, & Terman, David (2013). Modeling the neuroprotective role of enhancing astrocyte mitochondrial metabolism during stroke. Biophysical Journal, 104, 1752-1763.
Diekman, Casey, & Golubitsky, Martin, & McMillen, Tyler, & Wang, Yunjiao (2012). Reduction and dynamics of a generalized rivalry network with two learned patterns. SIAM Journal of Applied Dynamical Systems, 11, 1270-1309.
Belle, Mino, & Diekman, Casey, & Forger, Daniel, & Piggins, Hugh (2009). Daily electrical silencing in the mammalian circadian clock. Science, 326, 281-284.
Diekman, Casey, & Sastry, P.S., & Unnikrishnan, K.P. (2009). Statistical significance of sequential firing patterns in multi-neuronal spike trains. Journal of Neuroscience Methods, 182, 279-284.
Diekman, Casey, & Forger, Daniel (2009). Clustering predicted by an electrophysiological model of the suprachiasmatic nucleus. Journal of Biological Rhythms, 24, 322-333.
Diekman, Casey, & He, W, & Prabhu, N, & Cramer, H (2003). Hybrid methods for automated diagnosis of breast tumors. Analytical and Quantitative Cytology and Histology , 25, 183-190.
COLLAPSE
Technical Report
Entrainment dynamics of forced hierarchical circadian systems revealed by 2-dimensional maps
arXiv, April (2nd Quarter/Spring) 2020
arXiv, April (2nd Quarter/Spring) 2020
Conference Proceeding
Experimental validation of a closed-loop respiratory control model using dynamic clamp
Conf Proc IEEE Eng Med Biol Soc. , July (3rd Quarter/Summer) 2018
Modeling the Caenorhabditis elegans locomotion network: an opportunity in connectivity
Society for Neuroscience, October (4th Quarter/Autumn) 2015
Spontaneous autoresuscitation in a model of respiratory control
Conf Proc IEEE Eng Med Biol Soc , August 2012
Conf Proc IEEE Eng Med Biol Soc. , July (3rd Quarter/Summer) 2018
Modeling the Caenorhabditis elegans locomotion network: an opportunity in connectivity
Society for Neuroscience, October (4th Quarter/Autumn) 2015
Spontaneous autoresuscitation in a model of respiratory control
Conf Proc IEEE Eng Med Biol Soc , August 2012