Yehoshua Perl
Yehoshua Perl
Professor, Computer Science
Guttenberg Information Technologies Center (GITC)
Education
Ph.D.; The Weizmann Institute of Science; ; 1975
M.S.; The Weizmann Institute of Science; ; 1971
B.S.; Bar-Ilan University; ; 1969
M.S.; The Weizmann Institute of Science; ; 1971
B.S.; Bar-Ilan University; ; 1969
2025 Spring Courses
CS 700B - MASTER'S PROJECT
CS 726 - INDEPENDENT STUDY II
CS 792 - PRE-DOCTORAL RESEARCH
CS 725 - INDEPENDENT STUDY I
CS 701B - MASTER'S THESIS
CS 790A - DOCT DISSERTATION & RES
CS 488 - INDEPENDENT STUDY IN CS
CS 726 - INDEPENDENT STUDY II
CS 792 - PRE-DOCTORAL RESEARCH
CS 725 - INDEPENDENT STUDY I
CS 701B - MASTER'S THESIS
CS 790A - DOCT DISSERTATION & RES
CS 488 - INDEPENDENT STUDY IN CS
Past Courses
CS 435: ADV DATA STRUCT-ALG DES
CS 610: DATA STRUCTURE & ALG
CS 698: ST:DEEP WEB & MEDICAL TERMINOLG
CS 786: ST:DEEP WEB
CS 610: DATA STRUCTURE & ALG
CS 698: ST:DEEP WEB & MEDICAL TERMINOLG
CS 786: ST:DEEP WEB
Conference Paper
“Skimming of Electronic Health Records Highlighted by an Interface Terminology Curated with Machine Learning Mining”
17th International Conference on Health Informatics—HEALTHINF, 2024.
“Using annotation for computerized support for fast skimming of cardiology electronic health record notes”
IEEE, December 2023.
17th International Conference on Health Informatics—HEALTHINF, 2024.
“Using annotation for computerized support for fast skimming of cardiology electronic health record notes”
IEEE, December 2023.
Journal Article
Ling Zheng, Yehoshua Perl, Yongqun He. 2023. “Big knowledge visualization of the COVID-19 CIDO ontology evolution.” BMC Medical Informatics and Decision Making, vol. 23, pp. 1-18.
V K Keloth, S Zhou, L Lindemann, L Zheng, G Elhanan, A J Einstein, James Geller, Yehoshua Perl. 2023. “Mining of EHR for interface terminology concepts for annotating EHRs of COVID patients..” BMC medical informatics and decision making, vol. 23, no. Suppl 1, pp. 1-18.
Michael H. Halper, Larisa Soldatova Soldatova, Matthias Brochhausen, Fatima S. Maikore, Christopher Ochs, Yehoshua Perl. 2023. “Guidelines for the Reuse of Ontology Content.” Applied Ontology, vol. 18, no. 1, pp. 5-29.
Cong Liu, Junghwan Lee, Casey Ta, Ali Soroush, James R Rogers, Jae Hyun Kim, Karthik Natarajan, Jason Zucker, Yehoshua Perl, Chunhua Weng. 2022. “Risk Factors Associated With SARS-CoV-2 Breakthrough Infections in Fully mRNA-Vaccinated Individuals: Retrospective Analysis.” JMIR Health and surveillance, vol. 8, no. 5:e35311.
Ling Zheng, Yehoshua Perl, Yongqun He, Christopher Ochs, James Geller, Hao Liu, Vipina K Keloth. 2021. “Visual Comprehension and Orientation into the COVID-19 CIDO Ontology. Journal of Biomedical Informatics.” Journal of Biomedical Informatics, vol. 120, no. C.
V K Keloth, S Zhou, L Lindemann, L Zheng, G Elhanan, A J Einstein, James Geller, Yehoshua Perl. 2023. “Mining of EHR for interface terminology concepts for annotating EHRs of COVID patients..” BMC medical informatics and decision making, vol. 23, no. Suppl 1, pp. 1-18.
Michael H. Halper, Larisa Soldatova Soldatova, Matthias Brochhausen, Fatima S. Maikore, Christopher Ochs, Yehoshua Perl. 2023. “Guidelines for the Reuse of Ontology Content.” Applied Ontology, vol. 18, no. 1, pp. 5-29.
Cong Liu, Junghwan Lee, Casey Ta, Ali Soroush, James R Rogers, Jae Hyun Kim, Karthik Natarajan, Jason Zucker, Yehoshua Perl, Chunhua Weng. 2022. “Risk Factors Associated With SARS-CoV-2 Breakthrough Infections in Fully mRNA-Vaccinated Individuals: Retrospective Analysis.” JMIR Health and surveillance, vol. 8, no. 5:e35311.
Ling Zheng, Yehoshua Perl, Yongqun He, Christopher Ochs, James Geller, Hao Liu, Vipina K Keloth. 2021. “Visual Comprehension and Orientation into the COVID-19 CIDO Ontology. Journal of Biomedical Informatics.” Journal of Biomedical Informatics, vol. 120, no. C.
SHOW MORE
Conference Proceeding
“Generating Training Data for Concept-Mining for an ‘Interface Terminology’ Annotating Cardiology EHRs”
IEEE International Conference on Bioinformatics and Biomedicine (BIBM), December 2020.
“Mining Concepts for a COVID Interface Terminology for Annotation of EHRs”
IEEE International Conference on Big Data (Big Data), December 2020.
“Transfer Learning from BERT to Support Insertion of New Concepts into SNOMED CT”
AMIA ... Annual Symposium proceedings, 2019.
“Training a Convolutional Neural Network with Terminology Summarization Data Improves SNOMED CT Enrichment”
AMIA Annual Symposium, November 2019.
“Enrichment of SNOMED CT Ophthalmology component to support EHR coding”
BIBM, December 2018.
IEEE International Conference on Bioinformatics and Biomedicine (BIBM), December 2020.
“Mining Concepts for a COVID Interface Terminology for Annotation of EHRs”
IEEE International Conference on Big Data (Big Data), December 2020.
“Transfer Learning from BERT to Support Insertion of New Concepts into SNOMED CT”
AMIA ... Annual Symposium proceedings, 2019.
“Training a Convolutional Neural Network with Terminology Summarization Data Improves SNOMED CT Enrichment”
AMIA Annual Symposium, November 2019.
“Enrichment of SNOMED CT Ophthalmology component to support EHR coding”
BIBM, December 2018.
SHOW MORE
Other
“Tribal abstraction network”
US20170039295A1, 2017.
“”
US9286381B2, 2016.
“How to Summarize Big Knowledge Subjects”
International Conference on Biological Ontology & BioCreative, August 2016.
“Neighborhood auditing tool and user interface”
US8788974, July (3rd Quarter/Summer) 2014.
“Intersection ontologies for organizing data”
US7636702, December 2009.
US20170039295A1, 2017.
“”
US9286381B2, 2016.
“How to Summarize Big Knowledge Subjects”
International Conference on Biological Ontology & BioCreative, August 2016.
“Neighborhood auditing tool and user interface”
US8788974, July (3rd Quarter/Summer) 2014.
“Intersection ontologies for organizing data”
US7636702, December 2009.